/*
 * Copyright 2010-2012 Susanta Tewari. <freecode4susant@users.sourceforge.net>
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program.  If not, see <http://www.gnu.org/licenses/>.
 */

package genomemap.tagging;

import genomemap.data.Clone;

/**
 *
 * @author stewari1
 */
public class LinkingCloneStrategy {

    /**
     * default order is: Clone.S_CLONE,Clone.R_CLONE,Clone.A_CLONE
     */
    private int[] cloneTypePrefOrder;

    /**
     * Constructs ...
     */
    public LinkingCloneStrategy() {


        // set the default clone type preference order
        cloneTypePrefOrder    = new int[3];
        cloneTypePrefOrder[0] = Clone.S_CLONE;
        cloneTypePrefOrder[1] = Clone.R_CLONE;
        cloneTypePrefOrder[2] = Clone.A_CLONE;
    }

    public int[] getCloneTypePrefOrder() {
        return cloneTypePrefOrder;
    }

    public void setCloneTypePrefOrder(int[] cloneTypePrefOrder) {
        this.cloneTypePrefOrder = cloneTypePrefOrder;
    }
}
